Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906586.1_cds_XP_016456736.1_50542
CDS Infomation

[gene=LOC107780684] [db_xref=GeneID:107780684] [protein=la-related protein 6B-like] [protein_id=XP_016456736.1] [location=complement(join(17257..17571,17736..17882,18674..18742,18828..18875,19198..19297,19393..19472,19631..19702,19900..19994,20169..20250,20964..21431))] [gbkey=CDS]
Sequence

ATGGCTCTGGAGGAATCGGCAACTGTGTTAGATTCCCTCCCCGATTCCTTCAATTCATCG
GCGGCTACGTCTTCATCCTCATCCGACCGTCCATTCGATCAAACCGCCTCTTCTTCACCG
TCCGATCCACCGCCCTCTCTTTCGAGAAATTCTTCACTCAACGCGCTTGCTCCGGCATTC
ATTCCACGAACTTCATCGTCTCCGTCGATTTCTCCGTCGACGTCGCTGACCGATTTGAAT
CAGGCCGGGAAAACGCTGGTGCACGTGTACGCTACTCCTGCTGCTACTCTTCATCCGGTT
CAGAACCATTTTGTTTATGCTCCTCAATTGCCGGTTCAGTATCCGTCGCCGTTTTATGGT
GGTGTTTTGGCCGGAGTTGCACAAGAGATGGTTATTGGTGCTGACTTGGATCATGCTAGT
AAAAATGGAGGGTTGACTGAAGAAGCTCTTCAAAAGATTATAAATCAAGTGGAGTTCTAC
TTCAGTGATTTAAATTTGGCAACAACTGATCATCTAATAAAGCATATGCTCAAGGATCCC
GAAGGATATGTACCAATATCCGTGGTTGCCTTGTTCAAGAAGATTAAAGCTCTTGTAGAT
AGTCATGCACAGCTTGCTCAAGTTTTGCGGAGCTCTACAAAGCTTGTAGTTCGTGACGAT
GGCATGAAGGTCAAACGCAAAATTTCTTTGACTGAAACCGACTTGAAAGAGTTGCTATCT
CGAATAGTGATTGCTGAAAATTTGCCCGAGGACCACTGCCACCAAAACCTCATGAAGATT
TTCTCAGCTGTTGGAAGTGTGAAGATGATTCGCACCTGCCAACCTCAGTATTCCAGTGGT
TGGGCTTCTTCAGGATCTAGAACCGCAAAATCAGATAGTATGATGTACAGCAACAAGTTA
CACGCTTTTGTGGAATACGAATCCATCAAATTGGCTGAGAGGGCGGTTGCAGAATTAAAT
GATGAGGATAACTGGAGAAATTGTCTAAAAGTCCGGTTACTTCTTAGACACACAGAAAAA
TGTGGCCAAGCTCGAGGGAAAAAAGTTGGTCATGATAGTGAACACAACTTCAAGGAAGAT
GATAGTTTTGCATTAGAGGTCAATGAAAAGCTTAATGAAGAGTCATCACACCATCTTGAT
GCTCGGTCCAATGAGCTTGCAGAGGAGCCTGACAGTGATGGGATGAGAAAAAGGTGTGGT
CGGGGTAAGGGACAAGGACAGGGTCAGGGACGTGGACATGGACGTCCCCAGTTTCATCAA
AACAGCTGTGGAGGTCATTTAGGGGCTCCCATGTCAAACATCAATCATGGAAGTAGTGTG
GGAAATGCCCCCTCAAATATCAATCGTGTTGGCCTAGGGCAGCCTGTTTTTGATCAGTCA
GCAGCAGCCAAGCAATCTTCTGTACCTCGTATGTCGGATGGCACTAAGGGATTCTCCATG
GGTCGAGGTAAACCAATGGCTATCAAAACTACGTGA

Peptide Sequence

PEP ID

XP_016456736.1
PEP Infomation

PREDICTED: la-related protein 6B-like [Nicotiana tabacum]
Sequence

MALEESATVLDSLPDSFNSSAATSSSSSDRPFDQTASSSPSDPPPSLSRNSSLNALAPAF
IPRTSSSPSISPSTSLTDLNQAGKTLVHVYATPAATLHPVQNHFVYAPQLPVQYPSPFYG
GVLAGVAQEMVIGADLDHASKNGGLTEEALQKIINQVEFYFSDLNLATTDHLIKHMLKDP
EGYVPISVVALFKKIKALVDSHAQLAQVLRSSTKLVVRDDGMKVKRKISLTETDLKELLS
RIVIAENLPEDHCHQNLMKIFSAVGSVKMIRTCQPQYSSGWASSGSRTAKSDSMMYSNKL
HAFVEYESIKLAERAVAELNDEDNWRNCLKVRLLLRHTEKCGQARGKKVGHDSEHNFKED
DSFALEVNEKLNEESSHHLDARSNELAEEPDSDGMRKRCGRGKGQGQGQGRGHGRPQFHQ
NSCGGHLGAPMSNINHGSSVGNAPSNINRVGLGQPVFDQSAAAKQSSVPRMSDGTKGFSM
GRGKPMAIKTT

Transcript Sequence

Gene sequence data has not been registered.